Two sample MR report


Telomere_length against wg lh intensity-contrast isthmuscingulate

Date: 23 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 0.0747949 0.1334666 0.5811355
Weighted median 23 -0.0886326 0.0643383 0.1683258
Inverse variance weighted 23 -0.1025892 0.0534259 0.0548308
Simple mode 23 -0.1872667 0.1386384 0.1905041
Weighted mode 23 -0.0867342 0.0877582 0.3337362

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 37.85699 21 0.0133948
Inverse variance weighted 41.61516 22 0.0069564

Test for directional horizontal pleiotropy

egger_intercept se pval
-0.0108914 0.0075432 0.1635325

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0014723 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8