Two sample MR report


Telomere_length against rfMRI connectivity (ICA25 edge 49)

Date: 22 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 0.0373037 0.0998207 0.7123687
Weighted median 23 0.0825285 0.0532281 0.1210295
Inverse variance weighted 23 0.0792349 0.0390156 0.0422701
Simple mode 23 0.0352547 0.0937523 0.7104879
Weighted mode 23 0.0625372 0.0653530 0.3490091

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 18.51151 21 0.6164442
Inverse variance weighted 18.71979 22 0.6625620

Test for directional horizontal pleiotropy

egger_intercept se pval
0.002575 0.0056423 0.6528094

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0006922 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8