Two sample MR report


Telomere_length against rfMRI connectivity (ICA100 edge 659)

Date: 22 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 0.1707165 0.0998189 0.1019526
Weighted median 23 0.0822167 0.0593658 0.1660779
Inverse variance weighted 23 0.0669226 0.0390154 0.0862922
Simple mode 23 0.1782568 0.1051816 0.1042328
Weighted mode 23 0.1694693 0.0782184 0.0413678

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 19.75254 21 0.5369804
Inverse variance weighted 21.02874 22 0.5189626

Test for directional horizontal pleiotropy

egger_intercept se pval
-0.006374 0.0056423 0.2713464

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0007264 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8