Two sample MR report


Telomere_length against rfMRI connectivity (ICA100 edge 47)

Date: 22 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 0.1723006 0.0998198 0.0990114
Weighted median 23 0.0967267 0.0572051 0.0908605
Inverse variance weighted 23 0.0837548 0.0390155 0.0318165
Simple mode 23 0.0494222 0.0937076 0.6031883
Weighted mode 23 0.0876568 0.0663733 0.2001877

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 11.67032 21 0.9480934
Inverse variance weighted 12.59908 22 0.9437435

Test for directional horizontal pleiotropy

egger_intercept se pval
-0.0054376 0.0056423 0.3461537

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0005214 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8