Two sample MR report


Telomere_length against rfMRI connectivity (ICA100 edge 1448)

Date: 23 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 0.1156610 0.0998204 0.2595891
Weighted median 23 0.0927050 0.0563219 0.0997668
Inverse variance weighted 23 0.0407284 0.0390154 0.2965296
Simple mode 23 0.1509175 0.0875900 0.0989177
Weighted mode 23 0.1248172 0.0702943 0.0896289

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 18.93134 21 0.5895449
Inverse variance weighted 19.59646 22 0.6082660

Test for directional horizontal pleiotropy

egger_intercept se pval
-0.0046016 0.0056423 0.4239113

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0006269 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8