Two sample MR report


Telomere_length against rfMRI connectivity (ICA100 edge 1320)

Date: 23 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 0.0619357 0.0998206 0.5416239
Weighted median 23 0.0381411 0.0557752 0.4940782
Inverse variance weighted 23 0.0401697 0.0390157 0.3032090
Simple mode 23 0.0523937 0.0925347 0.5769844
Weighted mode 23 0.0384287 0.0686671 0.5813800

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 12.20056 21 0.9340445
Inverse variance weighted 12.25668 22 0.9518492

Test for directional horizontal pleiotropy

egger_intercept se pval
-0.0013367 0.0056423 0.8150324

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0004035 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8