Two sample MR report


Telomere_length against rfMRI connectivity (ICA100 edge 1295)

Date: 23 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 0.0669726 0.1035404 0.5247522
Weighted median 23 0.0134315 0.0567968 0.8130577
Inverse variance weighted 23 0.0087359 0.0398892 0.8266465
Simple mode 23 0.0241822 0.0935255 0.7983763
Weighted mode 23 0.0052819 0.0634251 0.9343841

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 22.59463 21 0.3659663
Inverse variance weighted 22.99639 22 0.4019337

Test for directional horizontal pleiotropy

egger_intercept se pval
-0.0035763 0.0058526 0.5477155

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0006984 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8