Two sample MR report


Telomere_length against aseg lh volume choroid-plexus

Date: 22 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 0.1075739 0.1132027 0.3527811
Weighted median 23 0.0402815 0.0597475 0.5001866
Inverse variance weighted 23 0.0227496 0.0438964 0.6042794
Simple mode 23 0.0158778 0.1003429 0.8757145
Weighted mode 23 0.0972513 0.0777603 0.2241993

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 27.23455 21 0.1632237
Inverse variance weighted 28.09395 22 0.1725885

Test for directional horizontal pleiotropy

egger_intercept se pval
-0.0052082 0.006398 0.4247564

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0008617 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

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Comparison of results using different MR methods

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Funnel plot

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Leave-one-out sensitivity analysis

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