Two sample MR report


Telomere_length against aseg lh volume Caudate

Date: 22 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 -0.1330160 0.1338342 0.3315930
Weighted median 23 -0.0860361 0.0582754 0.1398440
Inverse variance weighted 23 -0.0499360 0.0516466 0.3336040
Simple mode 23 -0.0971838 0.0972314 0.3284150
Weighted mode 23 -0.1252434 0.0649014 0.0666329

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 38.06624 21 0.0126602
Inverse variance weighted 38.89065 22 0.0145245

Test for directional horizontal pleiotropy

egger_intercept se pval
0.0051011 0.007564 0.50742

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0012285 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8