Two sample MR report


Telomere_length against aseg global volume VentricleChoroid

Date: 22 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 -0.0280045 0.1149963 0.8099615
Weighted median 23 0.0679485 0.0554988 0.2208303
Inverse variance weighted 23 -0.0202636 0.0439104 0.6444570
Simple mode 23 0.0606397 0.0903656 0.5091745
Weighted mode 23 0.0573301 0.0623325 0.3676811

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 28.10412 21 0.1372231
Inverse variance weighted 28.11127 22 0.1720227

Test for directional horizontal pleiotropy

egger_intercept se pval
0.0004753 0.0064993 0.9423952

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.00086 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8