Two sample MR report


Telomere_length against ThalamNuclei lh volume PuI

Date: 22 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 -0.0166208 0.1240369 0.8946797
Weighted median 23 -0.0172861 0.0593010 0.7706704
Inverse variance weighted 23 -0.0092025 0.0473610 0.8459364
Simple mode 23 -0.0204614 0.1002408 0.8401343
Weighted mode 23 -0.0418086 0.0681778 0.5460129

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 32.69657 21 0.0496918
Inverse variance weighted 32.70315 22 0.0661734

Test for directional horizontal pleiotropy

egger_intercept se pval
0.0004555 0.0070103 0.9488101

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0009927 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8