Two sample MR report


Telomere_length against QC dMRI eddy outlier slices

Date: 23 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 -0.0020541 0.1089333 0.9851339
Weighted median 23 -0.0079488 0.0574376 0.8899326
Inverse variance weighted 23 -0.0295597 0.0416680 0.4780695
Simple mode 23 -0.0509185 0.0938670 0.5929593
Weighted mode 23 -0.0392470 0.0736266 0.5993399

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 24.73245 21 0.2589378
Inverse variance weighted 24.82107 22 0.3057076

Test for directional horizontal pleiotropy

egger_intercept se pval
-0.001689 0.006157 0.7865218

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0007693 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8