Two sample MR report


Telomere_length against IDP dMRI TBSS L3 Medial lemniscus L

Date: 22 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 0.1512335 0.1147926 0.2018817
Weighted median 23 0.0562246 0.0606922 0.3542436
Inverse variance weighted 23 0.0538698 0.0447083 0.2282346
Simple mode 23 0.1104207 0.1163328 0.3528408
Weighted mode 23 0.0717529 0.0887391 0.4274133

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 27.46050 21 0.1561255
Inverse variance weighted 28.57079 22 0.1575276

Test for directional horizontal pleiotropy

egger_intercept se pval
-0.0059787 0.0064883 0.3672792

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0009229 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8