Two sample MR report


Telomere_length against IDP dMRI TBSS L2 Tapetum L

Date: 22 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 0.0173240 0.1201054 0.8866862
Weighted median 23 0.0580637 0.0559405 0.2992910
Inverse variance weighted 23 0.0933565 0.0463725 0.0440948
Simple mode 23 0.0404904 0.0905002 0.6589555
Weighted mode 23 0.0365743 0.0586344 0.5391937

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 30.06017 21 0.0907856
Inverse variance weighted 30.73722 22 0.1016193

Test for directional horizontal pleiotropy

egger_intercept se pval
0.0046688 0.0067885 0.4991412

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0011029 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8