Two sample MR report


Telomere_length against IDP dMRI TBSS ICVF Pontine crossing tract

Date: 22 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 -0.1460673 0.1265805 0.2614859
Weighted median 23 -0.0192964 0.0613981 0.7533059
Inverse variance weighted 23 -0.0015720 0.0500700 0.9749535
Simple mode 23 0.1519929 0.1002289 0.1436419
Weighted mode 23 -0.0307751 0.0830167 0.7143990

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 33.38812 21 0.0420867
Inverse variance weighted 35.83338 22 0.0316380

Test for directional horizontal pleiotropy

egger_intercept se pval
0.0088727 0.0071545 0.2285964

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0010857 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8