Two sample MR report


Telomere_length against IDP dMRI ProbtrackX MO cgc r

Date: 22 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 0.0467521 0.1482137 0.7555433
Weighted median 23 0.0691466 0.0682479 0.3109801
Inverse variance weighted 23 0.0494331 0.0565926 0.3823954
Simple mode 23 0.2279945 0.1566240 0.1596036
Weighted mode 23 0.2507682 0.1565272 0.1234014

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 45.77813 21 0.0013675
Inverse variance weighted 45.77897 22 0.0021111

Test for directional horizontal pleiotropy

egger_intercept se pval
0.0001646 0.0083773 0.9845064

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0014353 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8