Two sample MR report


Telomere_length against IDP dMRI ProbtrackX MD cst r

Date: 22 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 0.3214754 0.1003855 0.0042795
Weighted median 23 0.1740457 0.0564704 0.0020557
Inverse variance weighted 23 0.1353115 0.0392320 0.0005627
Simple mode 23 0.1396866 0.0976427 0.1665990
Weighted mode 23 0.1627377 0.0625801 0.0163285

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 16.87698 21 0.7185362
Inverse variance weighted 20.93608 22 0.5246914

Test for directional horizontal pleiotropy

egger_intercept se pval
-0.0114315 0.005674 0.0569166

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0009949 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8