Two sample MR report


Telomere_length against IDP dMRI ProbtrackX L3 cgc l

Date: 22 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 0.1416423 0.1307179 0.2908393
Weighted median 23 0.0972427 0.0611508 0.1117868
Inverse variance weighted 23 0.1536546 0.0499234 0.0020853
Simple mode 23 0.1660256 0.1057275 0.1306139
Weighted mode 23 0.0783203 0.0721377 0.2893634

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 35.60745 21 0.0241907
Inverse variance weighted 35.62435 22 0.0333011

Test for directional horizontal pleiotropy

egger_intercept se pval
0.0007376 0.0073884 0.9214223

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0015441 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8