Two sample MR report


Telomere_length against IDP dMRI ProbtrackX L2 mcp

Date: 22 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 0.1457931 0.1357832 0.2951320
Weighted median 23 0.0546559 0.0660718 0.4081124
Inverse variance weighted 23 0.0688372 0.0523122 0.1882105
Simple mode 23 0.0349140 0.1356782 0.7993159
Weighted mode 23 0.0677930 0.1013628 0.5105710

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 38.42184 21 0.0114968
Inverse variance weighted 39.11548 22 0.0136881

Test for directional horizontal pleiotropy

egger_intercept se pval
-0.0047255 0.0076747 0.5446924

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0012785 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8