Two sample MR report


Telomere_length against IDP dMRI ProbtrackX L1 fma

Date: 22 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 -0.0736740 0.1144270 0.5266418
Weighted median 23 0.1230616 0.0626600 0.0495351
Inverse variance weighted 23 0.0771492 0.0457748 0.0919098
Simple mode 23 0.0304995 0.1270560 0.8125158
Weighted mode 23 0.0920964 0.0960682 0.3481499

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 27.28512 21 0.1616140
Inverse variance weighted 29.94931 22 0.1197016

Test for directional horizontal pleiotropy

egger_intercept se pval
0.0092613 0.0064676 0.1668731

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0010247 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8