Two sample MR report


Telomere_length against IDP dMRI ProbtrackX ICVF cgc r

Date: 22 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 -0.2684069 0.1492313 0.0864734
Weighted median 23 -0.1409732 0.0638669 0.0272933
Inverse variance weighted 23 -0.1588509 0.0578368 0.0060229
Simple mode 23 -0.1829055 0.1115938 0.1154306
Weighted mode 23 -0.1325848 0.0881651 0.1468475

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 46.40795 21 0.0011275
Inverse variance weighted 47.81369 22 0.0011481

Test for directional horizontal pleiotropy

egger_intercept se pval
0.0067274 0.0084349 0.434049

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.001945 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8