Two sample MR report


Telomere_length against IDP dMRI ProbtrackX FA fmi

Date: 22 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 -0.3101131 0.1639348 0.0724052
Weighted median 23 -0.1667816 0.0652431 0.0105788
Inverse variance weighted 23 -0.2275239 0.0630391 0.0003071
Simple mode 23 -0.1095486 0.1164734 0.3571513
Weighted mode 23 -0.1580974 0.0811849 0.0643654

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 56.00725 21 5.03e-05
Inverse variance weighted 56.80618 22 6.55e-05

Test for directional horizontal pleiotropy

egger_intercept se pval
0.0050714 0.0092659 0.5899285

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0027397 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8