Two sample MR report


Telomere_length against IDP T2 FLAIR BIANCA WMH volume

Date: 23 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 0.0772333 0.1413562 0.5905678
Weighted median 23 0.1010929 0.0560412 0.0712465
Inverse variance weighted 23 0.1089810 0.0540385 0.0437236
Simple mode 23 0.1559371 0.0930623 0.1079689
Weighted mode 23 0.0365352 0.0620753 0.5621496

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 42.64502 21 0.0034880
Inverse variance weighted 42.76591 22 0.0050422

Test for directional horizontal pleiotropy

egger_intercept se pval
0.0019492 0.0079887 0.8096067

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.001535 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8