Two sample MR report


Telomere_length against IDP T1 FIRST left hippocampus volume

Date: 22 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 -0.0226094 0.0974952 0.8188583
Weighted median 23 -0.0320468 0.0537704 0.5511793
Inverse variance weighted 23 -0.0451403 0.0381073 0.2361924
Simple mode 23 -0.0378502 0.0826304 0.6513972
Weighted mode 23 -0.0458479 0.0643955 0.4839639

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 18.26291 21 0.6323115
Inverse variance weighted 18.32594 22 0.6864978

Test for directional horizontal pleiotropy

egger_intercept se pval
-0.0013836 0.0055107 0.8041998

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0005978 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8