Two sample MR report


Telomere_length against IDP SWI T2star left putamen

Date: 23 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 0.2246750 0.1261579 0.0894002
Weighted median 23 0.0741872 0.0640755 0.2469418
Inverse variance weighted 23 0.0765125 0.0500095 0.1260268
Simple mode 23 0.1827101 0.1183582 0.1369236
Weighted mode 23 0.0941147 0.0784004 0.2427367

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 31.85834 21 0.0605116
Inverse variance weighted 34.32809 22 0.0454765

Test for directional horizontal pleiotropy

egger_intercept se pval
-0.0091016 0.0071334 0.2159153

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0011509 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8