Two sample MR report


Telomere_length against IDP SWI T2star left amygdala

Date: 23 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 0.1640800 0.1024284 0.1241141
Weighted median 23 0.0075759 0.0569207 0.8941182
Inverse variance weighted 23 -0.0164097 0.0407796 0.6873894
Simple mode 23 -0.0994448 0.1047426 0.3527205
Weighted mode 23 -0.0237476 0.0726254 0.7467685

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 19.16027 21 0.5748594
Inverse variance weighted 22.82520 22 0.4116554

Test for directional horizontal pleiotropy

egger_intercept se pval
-0.0110874 0.0057916 0.0692931

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0006968 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8