Two sample MR report


Telomere_length against HippSubfield rh volume GC-ML-DG-head

Date: 22 April, 2022


Results from two sample MR:

method nsnp b se pval
MR Egger 23 0.1087145 0.0994049 0.2864939
Weighted median 23 0.1333234 0.0588643 0.0235172
Inverse variance weighted 23 0.0754592 0.0388448 0.0520666
Simple mode 23 0.1319735 0.1140054 0.2594381
Weighted mode 23 0.1589743 0.1027031 0.1359121

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 17.92021 21 0.6540481
Inverse variance weighted 18.05230 22 0.7028832

Test for directional horizontal pleiotropy

egger_intercept se pval
-0.0020419 0.0056182 0.7199074

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0357937 0.0006614 TRUE 0

Note - R2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8